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Applications of proteomics in cancer – Round up September 2025

Key Takeaway: The article discusses advancements in cancer research through proteoform analysis, emphasizing its potential in precision medicine. It highlights the importance of understanding proteoforms in cancer signaling and therapy responses. The update includes new sections in the Proteomics and cancer eBook, inviting collaboration and further exploration of these findings.
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POSITIVE FACTORS

  • Focus on innovative proteoform analysis for cancer research.
  • Collaboration with the cancer research community is encouraged.
  • Introduction of new sections in the eBook enhances knowledge sharing.

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From our catalyst data and publicly available data · not financial advice
Cash runway
~29 mo
Minimal dilution risk
Lead asset
MDMA
Phase 2 · Post-Traumatic Stress Disorder

Full Press Release Details

Proteoform Analysis
Tyler Ford
September 25, 2025
In this update to our Proteomics and cancer eBook, we focused on research leveraging proteoform analysis to advance our understanding of cancer. Proteoforms are largely untapped as sources of targets for novel cancer precision medicines and diagnostics. We look forward to working with members of the cancer research community to apply our single-molecule proteomics method, Iterative Mapping, to explore the proteomic landscape of cancer including its many proteoforms and thereby usher in a new wave of precision medicine.
Here, we provide a glimpse at the new sections of the eBook and encourage you to download the full eBook to learn more. We hope you enjoy these resources. Please reach out if you have any questions or would like to work with us to apply Iterative Mapping to your future work!
Download the full ebook here.
Read our preprint covering Iterative Mapping of tau proteoforms.

Proteoforms, metastasis and cancer therapy responses

It’s well-known that signaling is often drastically altered in cancer cells, but researchers rarely know how cancer mutations and treatments alter the proteoforms that determine signaling outcomes. Here, we highlight work from three studies leveraging proteomics to show proteoforms:
• Are diverse in cancer cells.
• Change during kinase inhibition and metastasis.
• Can have opposing abundance changes even when derived from the same protein.
Read the full post here.

Proteoforms, metastasis and cancer therapy responses

Functional differences in the KRAS proteoform landscape

When you study proteins at the proteoform level, you see functional biology at work. This post highlights research from the Kelleher Lab revealing how a KRAS proteoform alters signaling. We also discuss how Iterative Mapping of proteoforms on the Nautilus Platform can advance this essential work.
Read the full post here.

Functional differences in the KRAS proteoform landscape

Proteoforms and EGFR signaling

The literature is rife with evidence for the importance of proteoforms in a wide variety of biological functions. Yet, we’ve only recently started to conceptualize proteoforms as distinct biological entities and begun developing the technologies necessary for studying them at scale.
Here, we feature a distillation of 2010 work from Forest White’s Lab at MIT suggesting different patterns of modification on EGFR proteoforms may alter cancer growth.
Read the full post here.

Proteoforms and EGFR signaling

Updated Proteomics and cancer eBook

We’ve included the blog posts summarized above and many more in our full Proteomics and cancer eBook.
Download the Proteomics and cancer eBook here .
If you have a favorite example of the power of proteomics in cancer research, please share it with us and we may include it in our next eBook update!

Updated Proteomics and cancer eBook

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Frequently Asked Questions

What is proteoform analysis?

Proteoform analysis studies the different variants of proteins, which can have distinct functions.

How does proteoform analysis aid cancer research?

It helps identify novel targets for precision medicines and diagnostics in cancer.

What is the Nautilus Platform?

The Nautilus Platform is used for advanced proteoform studies to unlock cellular functions.

What updates are included in the eBook?

The eBook includes new sections on proteoforms, signaling, and cancer therapy responses.

Last updated: Sep 25, 2025