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PRELIMINARY NOTE These unaudited condensed Interim Consolidated Financial Statements for the three-month and nine-month periods ended

Key Takeaway: These unaudited condensed Interim Consolidated Financial Statements for the three-month and nine-month periods ended September 30, 2016 have been prepared in accordance with International Financial Reporting Standards ( IFRS ) as issued by the International Accounting Standards

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These unaudited condensed Interim Consolidated Financial Statements for the three-month and nine-month periods ended September 30,
2016 have been prepared in accordance with International Financial Reporting Standards ( IFRS ) as issued by the International Accounting Standards Board ( IASB ). The consolidated financial statements are presented in euros. All
references in this interim report to $, US$, U.S.$, U.S. dollars, dollars, and USD mean U.S. dollars and all references to and euros mean euros,
unless otherwise noted.
This interim report, including Management s Discussion and Analysis of Financial Condition and
Results of Operations, contains forward-looking statements within the meaning of the Private Securities Litigation Reform Act of 1995 and Section 27A of the Securities Act. All statements other than present and historical facts and
conditions contained in this interim report, including statements regarding our future results of operations and financial position, business strategy, plans and our objectives for future operations, are forward-looking statements. When used in this
interim report, the words anticipate, believe, can, could, estimate, expect, intend, is designed to, may, might,
plan, potential, predict, objective, should, or the negative of these and similar expressions identify forward-looking statements. Actual results, performance or events may differ
materially from those projected in any forward-looking statement. Factors that may cause actual results to differ from those in any forward-looking statement include, without limitation, those described under Risk Factors and
Special Note Regarding Forward-Looking Statements in our Annual Report on Form 20-F filed with the Securities and Exchange Commission on March 21, 2016 (the Annual Report ). As a result of these factors, we cannot assure
you that the forward-looking statements in this interim report will prove to be accurate. Furthermore, if our forward-looking statements prove to be inaccurate, the inaccuracy may be material. In light of the significant uncertainties in these
forward-looking statements, you should not regard these statements as a representation or warranty by us or any other person that we will achieve our objectives and plans in any specified time frame or at all. We undertake no obligation to publicly
update any forward-looking statements, whether as a result of new information, future events or otherwise, except as required by law.
As used in this interim report, the terms Cellectis, we, our, us, and the
Company refer to Cellectis S.A. and its subsidiaries, taken as a whole, unless the context otherwise requires.
PART I FINANCIAL INFORMATION 3
Item 1. Condensed Financial Statements (Unaudited) 3
Item 2. Management s Discussion & Analysis of Financial Condition and Results of Operations 29
Item 3. Quantitative and Qualitative Disclosures About Market Risks 38
Item 4. Controls and Procedures 39
PART II OTHER INFORMATION 39
Item 1. Legal Proceedings 39
Item 1A. Risk Factors 39
Item 2. Unregistered Sales of Equity Securities and Use of Proceeds 39
Item 3. Defaults Upon Senior Securities 39
Item 4. Mine Safety Disclosures 40
Item 5. Other Information 40
Item 6. Exhibits 40
PART I FINANCIAL INFORMATION
UNAUDITED INTERIM STATEMENTS OF CONSOLIDATED FINANCIAL POSITION
As of
Notes December 31, 2015 September 30, 2016
ASSETS
Non-current assets
Intangible assets 956 1,180
Property, plant, and equipment 6 5,043 15,141
Other non-current financial assets 845 612
Total non-current assets 6,844 16,933
Current assets
Inventories and accumulated costs on orders in process 158 106
Trade receivables 6,035 11,382
Subsidies receivables 7 9,102 14,535
Other current assets 8 4,685 7,252
Current financial assets 9.1 77,665
Cash and cash equivalents 9.2 314,238 186,303
Total current assets 334,218 297,243
TOTAL ASSETS 341,062 314,177
LIABILITIES
Shareholders equity
Share capital 10 1,759 1,767
Premiums related to the share capital 10 420,682 460,474
Treasury share reserve (184 ) (373 )
Currency translation adjustment (1,631 ) (1,933 )
Retained earnings (137,188 ) (158,032 )
Net income (loss) (20,544 ) (48,309 )
Total shareholders equity - Group Share 262,894 253,595
Non-controlling interests 725 1,471
Total shareholders equity 263,619 255,066
Non-current liabilities
Non-current financial liabilities 12.1 66 37
Non-current provisions 14 437 581
Total non-current liabilities 503 619
Current liabilities
Current financial liabilities 12.1 1,921 1,922
Trade payables 6,611 9,176
Deferred revenues and deferred income 13 54,758 41,893
Current provisions 14 953 467
Other current liabilities 15 12,697 5,034
Total current liabilities 76,940 58,492
TOTAL LIABILITIES AND SHAREHOLDERS EQUITY 341,062 314,177
The accompanying notes form an integral part of these unaudited condensed Interim Consolidated Financial
UNAUDITED INTERIM STATEMENTS OF CONSOLIDATED OPERATIONS
For the nine months ended September 30,
in thousands, except per share amounts
For the nine-month period ended September 30,
Notes 2015 2016
Revenues and other income
Revenues 16.1 23,356 32,892
Other income 16.1 3,845 6,053
Total revenues and other income 27,201 38,945
Operating expenses and other operating income (expenses)
Royalty expenses (1,153 ) (1,035 )
Research and development expenses 17.1 (36,375 ) (52,220 )
Selling, general and administrative expenses 17.1 (19,145 ) (27,839 )
Other operating income 515 380
Redundancy plan 14 259 3
Other operating expenses (432 ) (216 )
Total operating expenses and other operating income (expenses) (56,331 ) (80,926 )
Operating income (loss) (29,130 ) (41,981 )
Financial gain (loss) 515 (6,328 )
Net income (loss) (28,615 ) (48,309 )
Attributable to shareholders of Cellectis (28,786 ) (48,309 )
Attributable to non-controlling interests 171
Basic / Diluted earnings per share attributable to shareholders of Cellectis 18.1
Basic earnings per share ( /share) (0.85 ) (1.37 )
Diluted earnings per share ( /share) (0.85 ) (1.37 )
The accompanying notes form an integral part of these unaudited condensed Interim Consolidated Financial
UNAUDITED INTERIM STATEMENTS OF CONSOLIDATED COMPREHENSIVE INCOME
For the nine months ended September 30,
For the nine-month period ended September 30,
2015 2016
Net income (loss) (28,615 ) (48,309 )
Actuarial gains and losses 36 (94 )
Other comprehensive income (loss) that will not be reclassified subsequently to income or loss 36 (94 )
Currency translation adjustment (1,429 ) (320 )
Other comprehensive income (loss) that will be reclassified subsequently to income or loss (1,429 ) (320 )
Total Comprehensive income (loss) (30,008 ) (48,723 )
Attributable to shareholders of Cellectis (30,114 ) (48,705 )
Attributable to non-controlling interests 106 (18 )
The accompanying notes form an integral part of these unaudited condensed Interim Consolidated Financial
UNAUDITED INTERIM STATEMENTS OF CONSOLIDATED OPERATIONS
For the three months ended September 30,
in thousands, except per share amounts
For the three-month period ended September 30,
Notes 2015 2016
Revenues and other income
Revenues 16.2 7,600 10,091
Other income 16.2 2,379 1,215
Total revenues and other income 9,978 11,306
Operating expenses and other operating income (expenses)
Royalty expenses (334 ) (311 )
Research and development expenses 17.2 (16,156 ) (13,824 )
Selling, general and administrative expenses 17.2 (6,921 ) (8,712 )
Other operating income (6 )
Redundancy plan 24 3
Other operating expenses (37 ) (10 )
Total operating expenses and other operating income (expenses) (23,425 ) (22,860 )
Operating income (loss) (13,447 ) (11,555 )
Financial gain (loss) 680 (1,035 )
Net income (loss) (12,766 ) (12,590 )
Attributable to shareholders of Cellectis (12,766 ) (12,590 )
Attributable to non-controlling interests
Basic / Diluted earnings per share attributable to shareholders of Cellectis 18.2
Basic earnings per share ( /share) (0.36 ) (0.36 )
Diluted earnings per share ( /share) (0.36 ) (0.36 )
The accompanying notes form an integral part of these unaudited condensed Interim Consolidated Financial
UNAUDITED INTERIM STATEMENTS OF CONSOLIDATED COMPREHENSIVE INCOME
For the three months ended September 30,
For the three-month period ended September 30,
2015 2016
Net income (loss) (12,766 ) (12,590 )
Actuarial gains and losses 1
Other comprehensive income (loss) that will not be reclassified subsequently to income or loss 1
Currency translation adjustment (635 ) (429 )
Other comprehensive income (loss) that will be reclassified subsequently to income or loss (635 ) (429 )
Total Comprehensive income (loss) (13,399 ) (13,019 )
Attributable to shareholders of Cellectis (13,399 ) (13,013 )
Attributable to non-controlling interests (6 )
The accompanying notes form an integral part of these unaudited condensed Interim Consolidated Financial
UNAUDITED INTERIM STATEMENTS OF CONSOLIDATED CASH FLOWS
For the nine months ended September 30,
For the nine-month period ended September 30,
Notes 2015 2016
Cash flows from operating activities
Net loss for the period (28,615 ) (48,309 )
Reconciliation of net loss and of the cash used for operating activities
Adjustments for
Amortization and depreciation 1,228 1,457
Net loss on disposals 27 11
Net finance expenses (revenue) (515 ) 6,330
Expenses related to share-based payments 17,481 39,911
Provisions (618 ) (441 )
Interest (paid) / received 707 1,540
Operating cash flows before change in working capital (10,305 ) 499
Decrease (increase) in inventories (43 ) 52
Decrease (increase) in trade receivables and other current assets 2,775 (8,076 )
Decrease (increase) in subsidies receivables 785 (6,191 )
(Decrease) increase in trade payables and other current liabilities 564 (4,244 )
(Decrease) increase in deferred income (15,758 ) (12,846 )
Change in working capital (11,678 ) (31,305 )
Net cash flows provided by (used in) operating activities (21,983 ) (30,806 )
Cash flows from investment activities
Proceeds from disposal of property, plant and equipment 50
Sale (Acquisition) of subsidiaries net of cash disposed of (2,850 )
Acquisition of intangible assets (39 ) (302 )
Acquisition of property, plant and equipment (3,316 ) (11,259 )
Net change in non-current financial assets 84 192
Acquisition of current financial assets 9.1 (78,787 )
Net cash flows provided by (used in) investing activities (6,070 ) (90,156 )
Cash flows from financing activities
Increase in share capital net of transaction costs 196,804 648
Decrease in borrowings (1,054 ) (74 )
Treasury shares (89 ) (189 )
Net cash flows provided by (used in) financing activities 195,661 385
(Decrease) increase in cash 167,608 (120,577 )
Cash and cash equivalents at the beginning of the year 112,347 314,238
Effect of exchange rate changes on cash (599 ) (7,358 )
Cash and cash equivalents at the end of the period 9.2 279,356 186,303
The accompanying notes form an integral part of these unaudited condensed Interim Consolidated Financial
UNAUDITED INTERIM STATEMENTS OF CHANGES IN CONSOLIDATED SHAREHOLDERS EQUITY
in thousands, except share data
Equity
Share Capital attributable
Ordinary Shares Currency Retained to Non Total
Number of shares Amount Premiums Treasury shares translation adjustment earnings (deficit) Income (Loss) shareholders of Cellectis controlling interests Shareholders Equity
As of January 1, 2015 29,446,721 1,472 192,842 (251 ) (762 ) (132,536 ) 20 60,787 (1,259 ) 59,528
Net Loss (28,786 ) (28,786 ) 171 (28,615 )
Other comprehensive income (loss) (1,362 ) 34 (1,328 ) (65 ) (1,393 )
Total comprehensive income (loss) (1,362 ) 34 (28,786 ) (30,114 ) 106 (30,008 )
Allocation of prior period loss 20 (20 )
Capital Increase 10 5,500,000 275 194,387 (3 ) 194,659 194,659
Purchase of non-controlling interests (4,653 ) (4,653 ) 1,153 (3,500 )
Treasury shares (89 ) (89 ) (89 )
Exercise of share warrants and employee warrants 10 153,997 8 1,496 (3 ) 1,501 1,501
Share based compensation 17,218 17,218 262 17,480
As of September 30, 2015 35,100,718 1,755 405,943 (340 ) (2,124 ) (137,140 ) (28,786 ) 239,307 262 239,570
As of January 1, 2016 35,178,614 1,759 420,682 (184 ) (1,632 ) (137,188 ) (20,544 ) 262,894 725 263,619
Net Loss (48,309 ) (48,309 ) (48,309 )
Other comprehensive income (loss) (302 ) (94 ) (395 ) (18 ) (413 )
Total comprehensive income (loss) (302 ) (94 ) (48,309 ) (48,705 ) (18 ) (48,723 )
Allocation of prior period loss (20,544 ) 20,544
Treasury shares (189 ) (189 ) (189 )
Exercise of share warrants and employee warrants 10 154,958 8 646 (5 ) 648 648
Share based compensation 39,147 39,147 764 39,911
Other movements (201 ) (201 ) (201 )
As of September 30, 2016 35,333,572 1,767 460,474 (373 ) (1,933 ) (158,032 ) (48,309 ) 253,594 1,471 255,066
The accompanying notes form an integral part of these unaudited condensed Interim Consolidated Financial
NOTES TO THE UNAUDITED INTERIM CONSOLIDATED FINANCIAL STATEMENTS
Cellectis S.A. (hereinafter Cellectis or we ) is a limited liability company ( soci t anonyme )
registered and domiciled in Paris, France. We are a gene-editing company, employing our core proprietary technologies to develop products in the emerging field of immuno-oncology. Our product candidates, based on gene-edited T-cells that express
chimeric antigen receptors, or CARs, seek to harness the power of the immune system to target and eradicate cancers. Our gene-editing technologies allow us to create allogeneic CAR T-cells, meaning they are derived from healthy donors rather than
the patients themselves. In addition to our focus on immuno-oncology, we are exploring the use of our gene-editing technologies in other therapeutic applications, as well as to develop healthier food products for a growing population.
We view our operations and manage our business in two operating and reportable segments that are engaged in the following activities: (1) Therapeutics,
which is focused on the development of products in the field of immuno-oncology and of novel therapies outside immuno-oncology to treat other human diseases; (2) Plants, which is focused on the development of new generation plant products in
the field of agricultural biotechnology on our own or through alliances with other companies in the agricultural industry.
presentation and statement of compliance
All financial information (unless indicated otherwise) is presented in thousands of euros.
2.1 Compliance with the IFRS accounting framework
IFRS include International Financial Reporting Standards ( IFRS ), International Accounting Standards ( the IAS ), as well as the
interpretations issued by the Standards Interpretation Committee ( the SIC ), and the International Financial Reporting Interpretations Committee ( IFRIC ).
The Interim Consolidated Financial Statements as of and for the three-month and nine-month periods ended September 30, 2016 have been prepared in
accordance with IAS 34 Interim Financial Reporting, as endorsed by the International Accounting Standards Board ( IASB ).
Consolidated Financial Statements as of and for the three-month and nine-month periods ended September 30, 2016 have been prepared using the same accounting policies and methods as those applied for the year ended December 31, 2015.
These Interim Consolidated Financial Statements as of and for the three-month and nine-month periods ended September 30, 2016 were approved by our Board
of Directors on November 22, 2016.
Cellectis reclassified certain expenses related to the year ended December 31, 2015 from SG&A expenses
to R&D expenses in the fourth quarter of 2015. This reclassification is effective starting in 2015, and is due to the increased level of efforts towards our R&D activities in order to develop product candidates and work toward clinical
phases. Starting in 2015, we classify personnel and other costs related to information technology, human resources, business development, legal, intellectual property and general management in Research and development expenses based on the time that
employees spent contributing to research and development activities versus general and administrative activities. We approved the reclassification in Q4 2015 and assess the performance of the consolidated company based on this new classification.
Three-month period ended Nine-month period ended
March 31, 2015 June 30, 2015 September 30, 2015 September 30, 2015
in thousands
Expenses reclassified from SG&A to R&D (1,836 ) (2,216 ) (2,681 ) (6,733 )
R&D expenses as reported (5,600 ) (10,565 ) (13,476 ) (29,641 )
R&D expenses as amended (7,436 ) (12,782 ) (16,157 ) (36,375 )
SG&A expenses as reported (7,195 ) (9,082 ) (9,602 ) (25,879 )
SG&A expenses as amended (5,359 ) (6,865 ) (6,921 ) (19,145 )
2.2 Application of new or amended standards or new amendments
The following pronouncements and related amendments have been adopted by us from January 1, 2016 but had no significant impact on the Interim Consolidated
Financial Statements:
2.3 Standards, interpretations and amendments issued but not yet effective
The following pronouncements and related amendments are applicable for first quarter accounting periods beginning after January 1, 2017. We
do not anticipate that the adoption of these pronouncements and amendments will have a material impact on our results of operations, financial position or cash flows.
IFRS 15 Revenue from Contracts with Customers
establishes a comprehensive framework for determining whether, how much and when revenue is recognized. It replaces existing revenue recognition guidance, including IAS 18 Revenue . IFRS 15 is effective for annual reporting periods
beginning on or after January 1, 2018, with early adoption permitted. We are assessing the potential impact on our consolidated financial statements resulting from the application of IFRS 15.
In January 2016, the IASB issued IFRS 16 Leases , which is effective for annual periods beginning on or after January 1, 2019. This new
standard aligns the accounting treatment of operating leases with that already applied to finance leases (i.e. recognition in the balance sheet of future lease payments and the associated rights of use).
Note 3. Consolidated entities
2015 and for the nine months ended September 30, 2016, the consolidated group of companies (sometimes referred to as the Group ) includes Cellectis S.A., Cellectis, Inc. and Calyxt, Inc. Cellectis, Inc. and Calyxt, Inc. are fully
owned by Cellectis S.A.
Our Interim Consolidated Financial Statements for the nine months ended September 30, 2015 include the
operations of Cellectis S.A.; our two French subsidiaries, Cellectis Bioresearch and Ectycell; our three U.S. subsidiaries, Calyxt, Inc., Cellectis, Inc. and Cellectis Bioresearch Inc. Non-controlling shareholders held a 24.5% interest in Cellectis
Bioresearch, Cellectis Bioresearch Inc. and Ectycell until May 18, 2015.
The following internal reorganization was completed in 2015:
Note 4. Reportable segments
Reportable segments are identified as components of an enterprise that have discrete financial information available for evaluation by the Chief
Operating Decision Maker ( CODM ), for purposes of performance assessment and resource allocation.
Cellectis CODM is composed of:
We view our operations and manage our business in two operating
and reportable segments that are engaged in the following activities:
There are inter-segment transactions between the two reportable segments, including allocation of corporate general and administrative expenses by Cellectis
S.A. to its subsidiaries and allocation of research and development expenses to the reportable segments.
These inter-segment transactions are generally
priced based on provisions of service agreements signed between our legal entities, according to which services are to be allocated at cost plus a mark-up of between 4% and 10%, depending on the nature of the service. According to a cash pooling
agreement with our subsidiaries, interest is allocated/paid to segments at 12-month Euribor plus 5%.
Information related to each reportable segment is
Last updated: Nov 22, 2016